Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897999.1_cds_XP_016448345.1_43008
CDS Infomation

[gene=LOC107773439] [db_xref=GeneID:107773439] [protein=scarecrow-like protein 13] [protein_id=XP_016448345.1] [location=26016..27650] [gbkey=CDS]
Sequence

ATGCAAGCATCTCAGGGACCACGAAGGTCGGGCGATGTCCATAGACTGTACCATCAGCCA
ATGCAGCAAGTTCAGCAATACTACACTCCTTACCAGGCTGTTGACAACAACATTTATAAC
GATAGCAGCAGCTCGGGGACACAGTTCTCTTTCCAGACACAGAATGAACAGGTCTTCACT
CTGGACTCATTGCCGGCTACTGACTATGCCATATACGATGCAGCTCCTTCCGTGAGCGTC
TCTTCCAACAGGAGTCCCTTCTCTCCTCAATGTTCTCAGTCATACATTTCTGATCCACAC
CATTCATTTGATAACACTTGTGGTTCGCCTGTAAGTGGGTGTTCAGGAGTCGATGATGGC
AACGGAATGAAGCATGCGCTGTGGGAACTGAAGAATAAGTTGCGAGGGCCTGAATCTGAT
ATTGATGATAGCAGCAGTTGCTCGTTCAATGGTGTATTCTCAAAACCATCTTCCTTGACA
AAGCGGAATCAAGTATTGGACATAGCCTCCAGATTGGACTTAAAAGATCTGCTTTTAGCC
TGCGCTGAAGCAGTAGCAGAAGCTGATATCTCAACTGCTGAAGTTCTGATGAATGTCTTG
GAGCAAAGGGTATCGGTTTCTGGCGAACCTATGCAACGACTGAGTGCTTACATGTTGGAA
GGGCTAAGAGCACGATTACTGTCCTCCGGAAGTACCATATACAAAAAACTGAAATGCAAC
GAACCAACTAGCTCAGATTTGTTGTCTTACATGCAAGTCCTCTATCACATCTGCCCGTAC
TACAAGTTCGCCTATATGTCCGCCAATGTCGTCATCGGGGAAGCCATGAGGAATGAGAAT
ACAATCCATATCATTGATTTTCAAATAGCACAGGGAAGTCAATGGATGTTCCTCCTCCAC
GATCTTGCTCGTCGGCCTGGTGGACCGCCATATGTCCGCGTCACAGGCGTCGATGATTCC
CAATCAGCTCATGCACGGGGTGGAGGACTTAAGCTAGTCGGTGAAAGGTTAGCAAAAGTT
GCGGAGTCTTGTGGAGTGTCTTTCGAATTCCATGGTGCTGCCATGTCAGGCTGTAGGGTC
GAACTAGAGAACCTGCAAGTTAGACATGGAGAAGCACTGGCAGTTAATTTCCCTTACATG
TTACACCACATGCCAGATGAGAGCGTAAGCACTATGAACCATCGAGATCGCCTATTAAGA
CTAGTGAAGAGCTTGTCTCCCAAAATTGTCACCCTAGTTGAACAAGAATCGAACACCAAC
ACCGCCCCTTTCCTTCCAAGGTTCCGTGAAACTCTAGATTACTACACAGCAATGTTTGAG
TCAACTGATGCAGCTCGTTCAAGGGATGACAAGCAGCGGATCAGTGCAGAGGAGCATTGT
ATTGCACGAGATGTTGTCAATATAATAGCATGTGAAGGGGCTGACAGAGTGGAAAGACAC
GAACCATTTGGCAAGTGGAGGTCAAGACTTGTGATGGCTGGATTTACTCCTATCTCTTTG
AGTCCATCAGTTGGTGAGACCATCAAGGACATGTTGAAAGAGTATAGCCCAAATTATAAG
CTTGCCGAAAGCCAGGAGGTGCTTTATCTTGGATGGAAGAACCGAGCTTTGGCAACTTCT
TCTGCTTGGCGATGA

Peptide Sequence

PEP ID

XP_016448345.1
PEP Infomation

PREDICTED: scarecrow-like protein 13 [Nicotiana tabacum]
Sequence

MQASQGPRRSGDVHRLYHQPMQQVQQYYTPYQAVDNNIYNDSSSSGTQFSFQTQNEQVFT
LDSLPATDYAIYDAAPSVSVSSNRSPFSPQCSQSYISDPHHSFDNTCGSPVSGCSGVDDG
NGMKHALWELKNKLRGPESDIDDSSSCSFNGVFSKPSSLTKRNQVLDIASRLDLKDLLLA
CAEAVAEADISTAEVLMNVLEQRVSVSGEPMQRLSAYMLEGLRARLLSSGSTIYKKLKCN
EPTSSDLLSYMQVLYHICPYYKFAYMSANVVIGEAMRNENTIHIIDFQIAQGSQWMFLLH
DLARRPGGPPYVRVTGVDDSQSAHARGGGLKLVGERLAKVAESCGVSFEFHGAAMSGCRV
ELENLQVRHGEALAVNFPYMLHHMPDESVSTMNHRDRLLRLVKSLSPKIVTLVEQESNTN
TAPFLPRFRETLDYYTAMFESTDAARSRDDKQRISAEEHCIARDVVNIIACEGADRVERH
EPFGKWRSRLVMAGFTPISLSPSVGETIKDMLKEYSPNYKLAESQEVLYLGWKNRALATS
SAWR

Transcript Sequence

Gene sequence data has not been registered.